BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007G06LP1|AL425755
(778 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1431 1523 0.0
>3x_Contig1431
Length = 10954
Score = 1523 bits (767), Expect = 0.0
Identities = 776/779 (99%), Gaps = 1/779 (0%)
Strand = Plus / Minus
Query: 1 gtagttctggatgttggctttcaagtaatcgttccttgattttccgctttgtgattgtct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10246 gtagttctggatgttggctttcaagtaatcgttccttgattttccgctttgtgattgtct 10187
Query: 61 ccatttcgaggttaatatatcccaactgtaatttaggttgtttggtttgtagtgtatacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10186 ccatttcgaggttaatatatcccaactgtaatttaggttgtttggtttgtagtgtatacc 10127
Query: 121 ctgttggtcaagcaaagacgctaatagataatcatcgtttactaaatcggtaatctgtaa 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10126 ctgttggtcaagcaaagacgctaatagataatcatcgtttactaaatcggtaatctgtaa 10067
Query: 181 tgtctctaaatctatcaaatttatccccttttcgttctttgcccatccgtttcccccatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10066 tgtctctaaatctatcaaatttatccccttttcgttctttgcccatccgtttcccccatc 10007
Query: 241 tagaatatcttcgatacactcttgaggagtatattcaccgggtctagggtcccatgggaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 10006 tagaatatcttcgatacactcttgaggagtatattcaccgggtctagggtcccatgggaa 9947
Query: 301 cttaaaggttttctgataaagtttctcaactactgggttagaaatagtcaatgatgctaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9946 cttaaaggttttctgataaagtttctcaactactgggttagaaatagtcaatgatgctaa 9887
Query: 361 cgtctccccaggctgatgcgtcas-tttggatgtgctaaatgtgatgttttatgcgtggk 419
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 9886 cgtctccccaggctgatgcgtcagctttggatgtgctaaatgtgatgttttatgcgtggt 9827
Query: 420 acttgataccctagaaccagcgctatcgggtgggtggacagaggaaagcggtgaagtgac 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9826 acttgataccctagaaccagcgctatcgggtgggtggacagaggaaagcggtgaagtgac 9767
Query: 480 attagaagaggtatctgaattattatcggtgaaattctctaagtttgccttaattttctg 539
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9766 attagaagaggtatctgaattattatcggtgaaattctctaagtttgccttaattttctg 9707
Query: 540 ggatagttgctctccattcggaagcgtaaaatcatcaaatttccctctgagtaactgcat 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9706 ggatagttgctctccattcggaagcgtaaaatcatcaaatttccctctgagtaactgcat 9647
Query: 600 cttgatggacatactgaggattgaattaactttcgatttttgtagaaggaaccgatcatg 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9646 cttgatggacatactgaggattgaattaactttcgatttttgtagaaggaaccgatcatg 9587
Query: 660 gaactcagttccattctgatcaatgaaatttgtgacatcaatgctcacattacccaaaag 719
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9586 gaactcagttccattctgatcaatgaaatttgtgacatcaatgctcacattacccaaaag 9527
Query: 720 aatctttccggatactttctgtgtataagcgtgattatgatggctaaatcttccctccg 778
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 9526 aatctttccggatactttctgtgtataagcgtgattatgatggctaaatcttccctccg 9468
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5056
Number of Sequences: 1807
Number of extensions: 5056
Number of successful extensions: 25
Number of sequences better than 1.0e-20: 1
length of query: 778
length of database: 10,358,551
effective HSP length: 16
effective length of query: 762
effective length of database: 10,329,639
effective search space: 7871184918
effective search space used: 7871184918
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)